The Allen Institute is an independent nonprofit bioscience research institute aimed at unlocking the mysteries of biology by accelerating foundational research, sharing open data and tools, and advancing human health.
The Allen Institute’s grantmaking is anchored by large research awards to major universities and medical centers, with the biggest recent grant going to the University of Washington for $3,459,548 in 2025. That pattern fits an institution built around foundational bioscience research and the sharing of open data and tools. Across the recent grants list, the institute also backed The Trustees of Princeton University with $3,388,837 and Massachusetts Institute of Technology with $2,518,196, showing a strong preference for established research environments. Its funding reaches across neuroscience, cell biology, immunology, synthetic biology, computational biology and machine learning, along with open data/resources and science education and training. The presence of fellowship and leadership programs alongside research awards suggests a funder that supports both project work and researcher development. Recent recipients include Icahn School of Medicine at Mount Sinai, Massachusetts General Hospital, Rockefeller University, and New York University, indicating steady engagement with institutions doing biomedical and translational research. The Allen Institute operates nationally and gives almost entirely to U.S. recipients, with Washington accounting for a small share of grants even as Seattle serves as its headquarters.
The Allen Institute supports a mix of biomedical research, neuroscience, and computational work. In neuroscience, it awarded $1,106,162 to Zetta Ai LLC for research, while its Shanahan Foundation Fellowship at the Interface of Data and Neuroscience is aimed at emerging researchers working between data science and neuroscience. Cell biology and biophysical research appear in the open-call Membrane Biophysics Approaches program, which is focused on membrane biophysics and biophysical approaches to cell biology. The institute also uses its grantmaking to support foundational bioscience through the Allen Discovery Center (ADC) 2024 program. Training and leadership development are part of the portfolio as well. Through Next Generation Leaders, the foundation fosters emerging leaders in bioscience, and OpenScope (Neural Dynamics) provides access and opportunities tied to neural dynamics and scientific computing tools.
Typical award sizes cluster in the mid-hundreds of thousands: p25 is $84,488, the median is $217,467, and p75 is $474,236. The recent grants list shows repeat relationships over multiple years, including awards to the University of Washington in 2023, 2024, and 2025, plus repeated funding for Massachusetts Institute of Technology, Icahn School of Medicine at Mount Sinai, Columbia University, Baylor College of Medicine, New York University, Massachusetts General Hospital, Rockefeller University, and Washington University in St Louis. The Allen Institute is a regular funder rather than a DAF and does not fund individuals or make program-related investments. Several active programs are open-call or application-based, including Membrane Biophysics Approaches, Allen Discovery Center (ADC) 2024, and OpenScope (Neural Dynamics).
$19.2M
$367.1M
$272.1M
$270.7M
Most grants fall between $84K and $474K, with a median of $217K.
25th Percentile
$84K
Median
$217K
75th Percentile
$474K
About 8% of grants go to recipients in CA.
RUI COSTA
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The Allen Institute gives nationally, and every grant in the recipient-country distribution is in the United States. California is the top state by grant count, while Washington accounts for 8% of grants. Recent recipient cities include Seattle, Princeton, Cambridge, New York, Boston, Houston, Saint Louis, Chicago, and Philadelphia. The list also shows grants to institutions in Baltimore and Birmingham.
Its grantmaking covers neuroscience, cell biology, immunology, synthetic biology, computational biology and machine learning, plus open data/resources and science education and training. Recent awards also align with medical research, biomedical research, clinical research, health sciences research, and translational research.
Yes. The recent grants list includes awards across multiple years to the University of Washington, Massachusetts Institute of Technology, Icahn School of Medicine at Mount Sinai, Columbia University, Baylor College of Medicine, New York University, Massachusetts General Hospital, Rockefeller University, and Washington University in St Louis.
The grant-size distribution centers around mid-sized awards: p25 is $84,488, median grant size is $217,467, and p75 is $474,236. Recent grants also include several multimillion-dollar awards to major research institutions.
Yes. Active programs marked as open-call or application-based include Membrane Biophysics Approaches, Allen Discovery Center (ADC) 2024, and OpenScope (Neural Dynamics). The Allen Institute also lists the Shanahan Foundation Fellowship at the Interface of Data and Neuroscience and Next Generation Leaders as structured programs.
2025
Source: IRS Form 990-PF, fiscal year 2025.
Most recent grants reported to the IRS.
| Recipient | Location | Amount | Year | Purpose |
|---|---|---|---|---|
| UNIVERSITY OF WASHINGTON | SEATTLE, WA | $3,459,548 | 2025 | RESEARCH |
| THE TRUSTEES OF PRINCETON UNIVERSITY | PRINCETON, NJ | $3,388,837 | 2025 | RESEARCH |
| MASSACHUSETTS INSTITUTE OF TECHNOLOGY | CAMBRIDGE, MA | $2,518,196 | 2025 | RESEARCH |
| ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI | NEW YORK, NY | $1,939,391 | 2025 | RESEARCH |
| ZETTA AI LLC | SHERRELL, NY | $1,106,162 | 2025 | RESEARCH |
| MASSACHUSETTS GENERAL HOSPITAL | BOSTON, MA | $942,942 | 2025 | RESEARCH |
| ROCKEFELLER UNIVERSITY | BIRMINGHAM, AL | $814,693 | 2025 | RESEARCH |
| THE JOHN HOPKINS UNIVERSITY | BALTIMORE, MA | $658,856 | 2025 | RESEARCH |
| BOSTON UNIVERSITY | BOSTON, MA | $589,446 | 2025 | RESEARCH |
| WASHINGTON UNIVERSITY IN ST LOUIS | SAINT LOUIS, MO | $581,098 | 2025 | RESEARCH |
| THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK | NEW YORK, NY | $510,914 | 2025 | RESEARCH |
| NEW YORK UNIVERSITY | NEW YORK, NY | $507,779 | 2025 | RESEARCH |
| THE UNIVERSITY OF CHICAGO | CHICAGO, IL | $481,611 | 2025 | RESEARCH |
| THE BOARD OF TRUSTEES OF THE UNIVERSITY OF ILLINOIS | CHICAGO, IL | $428,247 | 2025 | RESEARCH |
| UNIVERSITY OF CALIFORNIA SAN DIEGO | LA JOLLA, CA | $142,483 | 2025 | RESEARCH |
| ADDGENE INC | WATERTOWN, MA | $137,464 | 2025 | RESEARCH |
| ARIZONA STATE UNIVERSITY | TEMPE, AZ | $125,089 | 2025 | RESEARCH |
| STANFORD UNIVERSITY | PALO ALTO, CA | $119,287 | 2025 | RESEARCH |
| SEATTLE CHILDREN'S RESEARCH INSTITUTE | SEATTLE, WA | $111,224 | 2025 | RESEARCH |
| TRUSTEES OF THE UNIVERSITY OF PENNSYLVANIA | PHILADELPHIA, PA | $103,848 | 2025 | RESEARCH |
| CEDARS-SINAI MEDICAL CENTER | LOS ANGELES, CA | $97,942 | 2025 | RESEARCH |
| REGENTS OF THE UNIVERSITY OF MINNESOTA | MINNEAPOLIS, MN | $73,097 | 2025 | RESEARCH |
| THE UNIVERSITY OF NEBRASKA MEDICAL CENTER | OMAHA, NE | $70,098 | 2025 | RESEARCH |
| KAISER FOUNDATION RESEARCH INSTITUTE | OAKLAND, CA | $61,749 | 2025 | RESEARCH |
| UNIVERSITY OF CALIFORNIA BERKELEY | BERKELEY, CA | $58,017 | 2025 | RESEARCH |
| BAYLOR COLLEGE OF MEDICINE | HOUSTON, TX | $43,567 | 2025 | RESEARCH |
| MOUNT HOLYOKE COLLEGE | SOUTH HADLEY, MA | $25,227 | 2025 | RESEARCH |
| APPALACHIAN STATE UNIVERSITY | BOONE, NC | $24,464 | 2025 | RESEARCH |
| NORTH CAROLINA STATE UNIVERSITY | RALEIGH, NC | $16,895 | 2025 | RESEARCH |
| CALIFORNIA STATE UNIVERSITY EAST BAY | HAYWARD, CA | $14,089 | 2025 | RESEARCH |
| CALIFORNIA INSTITUTE OF TECHNOLOGY | PASADENA, CA | $3,015 | 2025 | RESEARCH |
| UNIVERSITY OF WASHINGTON | SEATTLE, WA | $3,215,290 | 2024 | MEDICAL RESEARCH |
| MASSACHUSETTS INSTITUTE OF TECHNOLOGY | CAMBRIDGE, MA | $1,681,049 | 2024 | MEDICAL RESEARCH |
| THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK | NEW YORK, NY | $1,237,676 | 2024 | MEDICAL RESEARCH |
| ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI | NEW YORK, NY | $883,941 | 2024 | MEDICAL RESEARCH |
| THE TRUSTEES OF PRINCETON UNIVERSITY | PRINCETON, NJ | $851,964 | 2024 | MEDICAL RESEARCH |
| BAYLOR COLLEGE OF MEDICINE | HOUSTON, TX | $777,203 | 2024 | MEDICAL RESEARCH |
| ROCKEFELLER UNIVERSITY | BIRMINGHAM, AL | $713,348 | 2024 | MEDICAL RESEARCH |
| NEW YORK UNIVERSITY | NEW YORK, NY | $496,346 | 2024 | MEDICAL RESEARCH |
| WASHINGTON UNIVERSITY IN ST LOUIS | SAINT LOUIS, MO | $474,236 | 2024 | MEDICAL RESEARCH |
| MASSACHUSETTS GENERAL HOSPITAL | BOSTON, MA | $448,373 | 2024 | MEDICAL RESEARCH |
| BOSTON UNIVERSITY | BOSTON, MA | $313,013 | 2024 | MEDICAL RESEARCH |
| UNIVERSITY OF CALIFORNIA SAN DIEGO | LA JOLLA, CA | $286,650 | 2024 | MEDICAL RESEARCH |
| THE BOARD OF TRUSTEES OF THE UNIVERSITY OF ILLINOIS | CHICAGO, IL | $274,929 | 2024 | MEDICAL RESEARCH |
| UNIVERSITY OF CALIFORNIA BERKELEY | BERKELEY, CA | $230,932 | 2024 | MEDICAL RESEARCH |
| TRUSTEES OF THE UNIVERSITY OF PENNSYLVANIA | PHILADELPHIA, PA | $205,222 | 2024 | MEDICAL RESEARCH |
| ZETTA AI LLC | SHERRELL, NY | $186,451 | 2024 | MEDICAL RESEARCH |
| CALIFORNIA INSTITUTE OF TECHNOLOGY | PASADENA, CA | $181,637 | 2024 | MEDICAL RESEARCH |
| REGENTS OF THE UNIVERSITY OF MINNESOTA | MINNEAPOLIS, MN | $103,032 | 2024 | MEDICAL RESEARCH |
| SEATTLE CHILDREN'S RESEARCH INSTITUTE | SEATTLE, WA | $88,227 | 2024 | MEDICAL RESEARCH |
UNIVERSITY OF WASHINGTON
$3,459,548RESEARCH
THE TRUSTEES OF PRINCETON UNIVERSITY
$3,388,837RESEARCH
MASSACHUSETTS INSTITUTE OF TECHNOLOGY
$2,518,196RESEARCH
ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI
$1,939,391RESEARCH
ZETTA AI LLC
$1,106,162RESEARCH
MASSACHUSETTS GENERAL HOSPITAL
$942,942RESEARCH
ROCKEFELLER UNIVERSITY
RESEARCH
THE JOHN HOPKINS UNIVERSITY
$658,856RESEARCH
BOSTON UNIVERSITY
$589,446RESEARCH
WASHINGTON UNIVERSITY IN ST LOUIS
$581,098RESEARCH
THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK
$510,914RESEARCH
NEW YORK UNIVERSITY
$507,779RESEARCH
THE UNIVERSITY OF CHICAGO
$481,611RESEARCH
THE BOARD OF TRUSTEES OF THE UNIVERSITY OF ILLINOIS
$428,247RESEARCH
UNIVERSITY OF CALIFORNIA SAN DIEGO
$142,483RESEARCH
ADDGENE INC
$137,464RESEARCH
ARIZONA STATE UNIVERSITY
$125,089RESEARCH
STANFORD UNIVERSITY
$119,287RESEARCH
SEATTLE CHILDREN'S RESEARCH INSTITUTE
$111,224RESEARCH
TRUSTEES OF THE UNIVERSITY OF PENNSYLVANIA
$103,848RESEARCH
CEDARS-SINAI MEDICAL CENTER
$97,942RESEARCH
REGENTS OF THE UNIVERSITY OF MINNESOTA
$73,097RESEARCH
THE UNIVERSITY OF NEBRASKA MEDICAL CENTER
$70,098RESEARCH
KAISER FOUNDATION RESEARCH INSTITUTE
$61,749RESEARCH
UNIVERSITY OF CALIFORNIA BERKELEY
$58,017RESEARCH
BAYLOR COLLEGE OF MEDICINE
$43,567RESEARCH
MOUNT HOLYOKE COLLEGE
$25,227RESEARCH
APPALACHIAN STATE UNIVERSITY
$24,464RESEARCH
NORTH CAROLINA STATE UNIVERSITY
$16,895RESEARCH
CALIFORNIA STATE UNIVERSITY EAST BAY
$14,089RESEARCH
CALIFORNIA INSTITUTE OF TECHNOLOGY
$3,015RESEARCH
UNIVERSITY OF WASHINGTON
$3,215,290MEDICAL RESEARCH
MASSACHUSETTS INSTITUTE OF TECHNOLOGY
$1,681,049MEDICAL RESEARCH
THE TRUSTEES OF COLUMBIA UNIVERSITY IN THE CITY OF NEW YORK
$1,237,676MEDICAL RESEARCH
ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI
$883,941MEDICAL RESEARCH
THE TRUSTEES OF PRINCETON UNIVERSITY
$851,964MEDICAL RESEARCH
BAYLOR COLLEGE OF MEDICINE
$777,203MEDICAL RESEARCH
ROCKEFELLER UNIVERSITY
$713,348MEDICAL RESEARCH
NEW YORK UNIVERSITY
$496,346MEDICAL RESEARCH
WASHINGTON UNIVERSITY IN ST LOUIS
$474,236MEDICAL RESEARCH
MASSACHUSETTS GENERAL HOSPITAL
$448,373MEDICAL RESEARCH
BOSTON UNIVERSITY
$313,013MEDICAL RESEARCH
UNIVERSITY OF CALIFORNIA SAN DIEGO
$286,650MEDICAL RESEARCH
THE BOARD OF TRUSTEES OF THE UNIVERSITY OF ILLINOIS
$274,929MEDICAL RESEARCH
UNIVERSITY OF CALIFORNIA BERKELEY
$230,932MEDICAL RESEARCH
TRUSTEES OF THE UNIVERSITY OF PENNSYLVANIA
$205,222MEDICAL RESEARCH
ZETTA AI LLC
$186,451MEDICAL RESEARCH
CALIFORNIA INSTITUTE OF TECHNOLOGY
$181,637MEDICAL RESEARCH
REGENTS OF THE UNIVERSITY OF MINNESOTA
$103,032MEDICAL RESEARCH
SEATTLE CHILDREN'S RESEARCH INSTITUTE
$88,227MEDICAL RESEARCH